DNA Damage Atlas


GSM3428243-24_OGG1-APseq_6Gy_30min_rep3_enrichment




Basic Information

Manual

Sample ID:   

SRR8066563


Source Project ID:   

GSE121005

Cell Type:   

HepG2


Organism:   

Homo sapiens


Treatment:   

X-ray


Treatment Time:   

30min


Treatment Dose:   

6Gy


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2000


Technique:   

OGG1-AP-seq


Others:   

condition: GSM3428231-12_OGG1-APseq_6Gy_30min_rep3_input


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr9_gl000199_random82796832138300320.1348/
chr9_gl000199_random91158930609188218.4603/
chr1622525967225266702252639510.8577/
chr101281526128235712820859.18524/
chr142313432023134819231345689.17788/
chr93341997633420519334202468.43418/
chr212006731620067879200675968.13457/
chr51193268051193273741193270888.04879/
chr71429593781429600111429596347.23501/
chr223972589839726548397262057.04579/
Download the Full Peak List



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab