DNA Damage Atlas


GSM3487640-sir2_sample_1




Basic Information

Manual

Sample ID:   

SRR8240431


Source Project ID:   

GSE122882

Organism:   

Saccharomyces cerevisiae


Genotype:   

sir2 mutant


Harvested Time:   

collected at 4 hr after transfer to sporulation medium.


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2500


Technique:   

SPO11-oligo


Others:   

epitope tag: Spo11-Flag


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXII4510084554304530763837.47-
chrIV8350788368708358622519.25+
chrII6421046435606427211787.9-
chrVI9467696623957961648.06+
chrXIII7974607989777982201634.6+
chrVI7413275256746991614.03-
chrVII6089816108606101501566.36-
chrXVI3389973402583395301559.15-
chrXVI6945846959936951761478.25+
chrXV2671962683852677661477.12-
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrIV8350788368618358622551.34+
chrVII6089816108606101501771.57-
chrVI9467696623957961700.03+
chrII6421046434986427211648.22-
chrVII8480798495248488251627.12+
chrX2804532814432808781581.01+
chrXV2671962683852677661532.28-
chrVIII1214821231961221601485.45-
chrXIII7974607989597982201483.45+
chrIV1979791991611985831481.62+
Download the Full Merged Peak List



Motif Analysis

Manual





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