DNA Damage Atlas


GSM3583263-TAK_1363-S_cerevisiae_HydEn-seq_rnh201_RNaseHII




Basic Information

Manual

Sample ID:   

SRR8503253


Source Project ID:   

GSE125855

Organism:   

Saccharomyces cerevisiae


Strain:   

rnh201delta


Treatment:   

RNase HII


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 4000


Technique:   

HydEn-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr8_ref_v256231456264756257423077.8-
chr14_ref_v278366378427778426820228.6-
chr3_ref_v23251120617696.6+
chr4_ref_v203088910114.3+
chr11_ref_v266587366644166640310031.7-
chr3_ref_v23119293124423124117666.46-
chr6_ref_v24165521147146964.48+
chr12_ref_v24581584595704587636950.91+
chr10_ref_v27447157453417453376792.19-
mit_ref_v21249912874125086312.33+
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr8_ref_v256231456264056257416865.4-
chr14_ref_v278371478427678426815454.2-
chr3_ref_v25250820612839.5+
chr4_ref_v21304897490.44+
chr12_ref_v24581624595044587637081.07+
chr11_ref_v26658986664376664036944.76-
chr12_ref_v24597754602434598196379.91+
chr12_ref_v24671454686734679006354.38+
chr3_ref_v23119423124353124115255.34-
chr10_ref_v27447677453417453375229.3-
Download the Full Merged Peak List



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab