DNA Damage Atlas


GSM3714953-HTGTS_PB_ZFN_NT_ASISI




Basic Information

Manual

Sample ID:   

SRR8870275


Source Project ID:   

GSE129528

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

NT


Genotype:   

LIG4-/-


In-situ Treatment:   

G1


Targeted break:   

Tcrβ enhancer on chromosome 6


Layout:   

SINGLE


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr67004383970044393700439935052.5+
chr31459888131459897991459890513469.68+
chr66873588868736620687362753399.01-
chr152165648621656704216564863328.85+
chr67011593570117524701170103327.35-
chr66816416568167503681644023167.86-
chr61206115061206120261206118102791.11+
chr63835310338353664383533872771.92-
chr67017149270172362701717702740.7-
chr66968115169681653696813512065.14-
Download the Full Peak List



Motif Analysis

Manual





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