DNA Damage Atlas


GSM3731676-PWD_wt_DMC1_SSDS




Basic Information

Manual

Sample ID:   

SRR8932782 , SRR8932783 , SRR8932784 , SRR8932785 , SRR8932786


Source Project ID:   

GSE109874

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

PWD/Ph


Genotype:   

WT


Harvested Time:   

age: Adult


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

ChIP-seq (anti-DMC1)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrX1608979881608988831608980758.22859-
chrX9504653695047186950470566.10084-
chr159982072299821581998208775.97942+
chrX1126801631126817101126815215.68826+
chrX1574778611574784811574780745.36049+
chrX1522924811522936311522929545.02467-
chrX1698804831698808091698805064.28645-
chr106333348463333788633336963.97548+
chr51003822081003829601003827573.96755-
chr131194288891194296451194295623.79669+
Download the Full Peak List



Motif Analysis

Manual





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