DNA Damage Atlas


GSM3734883-CH12F3NCD_1




Basic Information

Manual

Sample ID:   

SRR8950224


Source Project ID:   

GSE130265

Cell Type:   

CH12F3 murine lymphoma cell


Organism:   

Mus musculus


Treatment:   

cytokine stimulation


Genotype:   

CH12F3NC-delta


Targeted break:   

target locus: non-coding IgH Sm-Sa deletion


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

CSR-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1211325854711326509411326208163193.7-
chr1211342344511342795111342684531978.3-
chr1935276282352765533527648211410.1-
chr143161403631614337316140366163.75+
chr174716502347165224471650236153.52+
chr126228217262282377622823726033.46-
Download the Full Peak List



Motif Analysis

Manual





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