DNA Damage Atlas


GSM3939107-WT_RAF_rep1




Basic Information

Manual

Sample ID:   

SRR9676443


Source Project ID:   

GSE134225

Organism:   

Saccharomyces cerevisiae


Strain:   

JKM179


Treatment:   

growth in raffinose


Genotype:   

WT


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

GLOE-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM1383717477164718797.04-
chrM1892319361189688571.19-
chrM1788118726181057900.39+
chrM2052221667205696585.07-
chrXII4596294606854605046559.79+
chrM2846029387292186528.24+
chrM7911080142799186425.73+
chrM6042262182605425487.78-
chrM7360874462743945263.09+
chrM2612526729266165217.28+
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrM13837174211647114971.7-
chrM18954193271896813953.3-
chrM17881183201810512045.4+
chrM79110801427991811595.3+
chrM20522216662056911204-
chrM2846729387292189992.02+
chrM7360874462743949891.74+
chrM2612526729266169775.34+
chrM6042962182605429645.38-
chrM2457325581246238737-
Download the Full Merged Peak List



Motif Analysis

Manual





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