DNA Damage Atlas

GSM3939109-WT_GAL_rep1

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR9676445


Source Project ID:   

GSE134225

Organism:   

Saccharomyces cerevisiae


Strain:   

JKM179


Treatment:   

growth in galactose


Genotype:   

WT


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

GLOE-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM18935194701896810824.3-
chrM13836174571398610699.3+
chrM18474186761862210527.2+
chrM2074421837212428901.85+
chrM2840129477293357744.34+
chrM2446825531250737557.12-
chrM7902980191798697409.8+
chrXII4596294606874605046732.71+
chrM4074342449414086720.88-
chrM2609926745266166552.89+
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrM18952193611896812484.6-
chrM13836174241398612405.5+
chrM20744217642124210493.3+
chrM7909180191798699807.69+
chrM2845829474293358733.66+
chrM6039762258605428625.23-
chrM7358374459743948594.96+
chrM2452025531250738480.95-
chrM2610526732266168230.13+
chrM3644837218365057898.28-
Download the Full Merged Peak List


Visualization

Manual



Motif Analysis

Manual





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