DNA Damage Atlas

GSM3939124-cdc9_AID

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR9676460


Source Project ID:   

GSE134225

Organism:   

Saccharomyces cerevisiae


Strain:   

W303 cdc9AID


Layout:   

SINGLE


Instrument model:   

NextSeq 500


Technique:   

GLOE-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXII4596304607144598949763.74-
chrM1384019332164694001.88+
chrM7913180157794713786.82-
chrM2059321196209143436.78+
chrM2844329202287653132.78-
chrM6055162209613853058.04+
chrM2130821613214803038.4+
chrM2607326751262212916.86-
chrM3644737204365862877.22-
chrM5942360173598252761.88-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab