DNA Damage Atlas


GSM3984760-saC9_R1_Rep2




Basic Information

Manual

Sample ID:   

SRR9856901


Source Project ID:   

GSE135064

Cell Type:   

293T


Organism:   

Homo sapiens


Treatment:   

nuclease delivery: PEI; saCas9:RAG1.1


Genotype:   

WT


Targeted break:   

RAG1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr115254049525443252542583946.75-
chr15504656555046994550467923296.23-
chr115246759524710852469602514.92-
chr87288907672889510728892852471.78-
chr89931707699317493993172842104.81-
chr16978529805797852951.443+
chr1225139352225139554225139352724.18+
chr9280402372804043928040437724.18-
chr1274736092747381327473809717.08-
chr12232456023252752324560545.583+
Download the Full Peak List



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab