DNA Damage Atlas


GSM4047459-MCF7_cells_E2_BLISS




Basic Information

Manual

Sample ID:   

SRR10045029


Source Project ID:   

GSE136365

Cell Type:   

MCF-7


Organism:   

Homo sapiens


Treatment:   

Estradiol


Treatment Time:   

1hr


Treatment Dose:   

100nM


Layout:   

SINGLE


Instrument model:   

illumina NextSeq 500


Technique:   

BLISS


Others:   

treatment: To induce estrogen signaling, cells were grown for two days on hormone-stripped media followed by 1hr treatment with 100nM E2


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr91343657251343660011343658622380.1/
chr91343609041343611801343610412223.87/
chr22139605632139607902139606751602.5/
chr87899215878992634789923301291.59/
chr142218915422189436221892941185.26/
chr162373977723739980237398771099.21/
chr21190556841190559091190557951093.94/
chr71122773881122776271122775061093.58/
chr52768089276829227681891009.27/
chr10847891308478933684789232976.464/
Download the Full Peak List



Motif Analysis

Manual





Copyright © 2023 All Rights Reserved by Wu lab