DNA Damage Atlas


GSM4062198-top2b-KO_G1_VP16_Rep2




Basic Information

Manual

Sample ID:   

SRR8670114


Source Project ID:   

GSE136943

Cell Type:   

RPE1


Organism:   

Homo sapiens


Treatment:   

VP16


Treatment Time:   

20min


Treatment Dose:   

100uM


Genotype:   

TOP2B-/-


Cell Phase:   

G1


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

CC-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM74805/91.5185/
chr154598763545987891/9.20532/
chr6148906536148906871/7.03451/
chr224306547343065871/5.92101/
chr10115786225115786705/5.72775/
chr124244793942448371/5.455/
chr193424667834247113/5.41738/
chr5164783520164784105/5.37108/
chr78187703581877547/5.36977/
chr221718542172293/5.36802/
Download the Full Peak List



Motif Analysis

Manual





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