DNA Damage Atlas

GSM4084726-sae2_meiosis_BioRep3_TechRep1

Basic Information Genome Browser Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR8602146


Source Project ID:   

GSE137685

Organism:   

Saccharomyces cerevisiae


Strain:   

SK1


Genotype:   

sae2Δ::kanMX


Cell Phase:   

M


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

CC-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
2641797643509/2959.54/
4698780700677/2656.05/
13386725389516/2400.85/
16339035340572/2329.9/
7608809611107/2249.11/
4834575837177/2239.01/
13797130799205/2174.52/
15218196219823/1960.34/
7847827849995/1958/
16784805786569/1819.8/
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
163392983404743397123103.72
26418566434686425642921.06
46988497006276996262567.65
137972227991837980192436.27
48346808371778359672231.63
76088486111076102542195.32
78478318498958488892103.23
152182002197452188182054.28
167848157865677857792053.17
133867443894543883212041.31
Download the Full Merged Peak List


Visualization

Manual



Motif Analysis

Manual





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