DNA Damage Atlas

GSM4084729-sae2_meiosis_BioRep5_TechRep2

Basic Information Genome Browser Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR8602149


Source Project ID:   

GSE137685

Organism:   

Saccharomyces cerevisiae


Strain:   

SK1


Genotype:   

sae2Δ::kanMX


Cell Phase:   

M


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

CC-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
2641886643484/3347.58/
4698810700605/3329.65/
13386766389427/2796.51/
16338967340545/2761.11/
7608827611134/2626.46/
13797234799190/2348.15/
7847843849980/2328.3/
36488066531/2247.32/
4834659837263/2171.22/
15218169219798/2103.91/
Download the Full Peak List


Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
26418866434846427723347.58/
46988107006056997513329.65/
163389823404823396012902.74/
133867663894273884442796.51/
76088276111256101882636.75/
78478778498908488432470.03/
137972347991907981792348.15/
36488066522656232259.04/
48346708371928359902241.23/
152181962197842188872157.92/
Download the Full Merged Peak List


Visualization

Manual



Motif Analysis

Manual





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