DNA Damage Atlas

GSM4094590-DIP_8oxodG_exp2_G0-arrested_MCF10A

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR10173730


Source Project ID:   

GSE137929

Cell Type:   

MCF-10A


Organism:   

Homo sapiens


Cell Phase:   

G0-arrested


Layout:   

SINGLE


Instrument model:   

Illumina HiSeq 2000


Technique:   

OxiDIP-Seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr14103371365103372809103372128153.653/
chr1410333635910333696510333663370.6725/
chrUn_gl00022976849438868265.6092/
chr1923647934236532422365136264.0551/
chr913749087213749255213749163059.4827/
chr1924060862240656842406502157.8553/
chr1565243152652476216524674757.2068/
chr1924361510243646612436262657.0991/
chr1951000000510038065100165255.8623/
chr817800681782044178105454.9843/
Download the Full Peak List


Visualization

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Motif Analysis

Manual





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