DNA Damage Atlas


GSM4097934-0.2mM-EndoIV-NT




Basic Information

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Sample ID:   

SRR10191399


Source Project ID:   

GSE138070

Organism:   

Escherichia coli


Strain:   

str. K-12 substr. DH10B


Treatment:   

H2O2


Treatment Dose:   

0.2mM


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

Nick-seq


Others:   

Following DNA purification, AP sites were expressed as strand-breaks using endonuclease IV (EndoIV)


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
Chromosome4013624401463240140151197.26/
Chromosome3516801351877535176581154.8/
Chromosome3968077396914339685391147.84/
Chromosome4368982436989943694181078.45/
Chromosome7231887236907235191035.08/
Chromosome4546188454662945464281026.22/
Chromosome3376553337731133769301017.2/
Chromosome4179539418049741800721014.8/
Chromosome4112116411286041124861013.81/
Chromosome3711778371289537121641005.4/
Download the Full Peak List



Motif Analysis

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