DNA Damage Atlas

GSM4100883-Xrcc4-KO_p53-KO_non-treatment_rep2

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR10202033


Source Project ID:   

GSE138136

Cell Type:   

v-Abl/Bcl2 transformed pro-B cell


Organism:   

Mus musculus


Treatment:   

NT


Genotype:   

Xrcc4-/- p53-/-


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr670698828706992927069902834436.8-
chr670572983705734607057318327915.3-
chr669059471690596726905967226498.7-
chr489216981892171848921718426237.6-
chr1445812813458130144581281419874+
chr670607766706082937060776617686.7+
chr668048842680490816804908116714.1-
chr712003265412003285812003285413054.5-
chr669607042696072486960724212927.7-
chr67011681770117038701170201.1026e+06-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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