DNA Damage Atlas

GSM4101227-NbBsmI-nickase-TdT

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR10203782


Source Project ID:   

GSE138173

Organism:   

Escherichia coli


Strain:   

str. K-12 substr. DH10B


Treatment:   

Nb.BsmI


Treatment Dose:   

10 U


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2000


Technique:   

Nick-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
Chromosome10035271003528/387898/
Chromosome10042141004215/387898/
Chromosome10074751007476/387898/
Chromosome10080391008040/387898/
Chromosome10118051011806/387898/
Chromosome10121281012129/387898/
Chromosome10183491018350/387898/
Chromosome10197741019775/387898/
Chromosome10201041020105/387898/
Chromosome10204821020483/387898/
Download the Full Peak List


Visualization

Manual





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