DNA Damage Atlas

GSM4101228-NbBsrDI-nickase-NT

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR10203783,SRR10203784,SRR10203785,SRR10203786


Source Project ID:   

GSE138173

Organism:   

Escherichia coli


Strain:   

str. K-12 substr. DH10B


Treatment:   

Nb.BsrDI


Treatment Dose:   

10 U


Layout:   

PAIRED


Instrument model:   

Illumina HiSeq 2500


Technique:   

Nick-seq


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
Chromosome10029111002912/259605/
Chromosome10031091003110/259605/
Chromosome1006910070/259605/
Chromosome10108421010843/259605/
Chromosome10144431014444/259605/
Chromosome10189041018905/259605/
Chromosome10190061019007/259605/
Chromosome10192631019264/259605/
Chromosome10220331022034/259605/
Chromosome10266901026691/259605/
Download the Full Peak List


Visualization

Manual





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