DNA Damage Atlas


GSM4120373-DMCPD8hrR1




Basic Information

Manual

Sample ID:   

SRR10277910


Source Project ID:   

GSE138846

Cell Type:   

S2-DGRC cell


Organism:   

Drosophila melanogaster


Treatment:   

UV (254 nm)


Treatment Dose:   

20J/m2


Genotype:   

WT


Harvested Time:   

repair time: 8 hours


Layout:   

SINGLE


Instrument model:   

illumina HiSeq 4000


Technique:   

XR-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr3R20853912088826208747839.4962/
chr3L22784442227888192278666724.5351/
chr3R29732416297370532973537223.3452/
chr2L10492891051933105132722.2921/
chr3R29106373291110112910696921.7339/
chr2L13281639132842151328293821.6412/
chr2L16074731610067160852921.4714/
chr2L19412701946543194373221.2983/
chr2L59463535949553594869221.2063/
chr3L73420373815773505321.1101/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chr3R20855212088826208747839.3016/
chr2L10492891051911105132722.3052/
chr2L59463535949387594869221.9155/
chr3R29106415291110112910696921.723/
chr2L13281639132842151328293821.6412/
chr2R15869009158711061587023821.6301/
chr2L16074731610067160852921.4714/
chr2L19412701946309194373221.4124/
chr2L86668538673232867050821.3317/
chr3R19592836195975671959611521.2638/
Download the Full Merged Peak List



Motif Analysis

Manual





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