DNA Damage Atlas


GSM4122787-EXO1-KO_END-seq




Basic Information

Manual

Sample ID:   

SRR10286890


Source Project ID:   

GSE138915

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

EXO1-/-


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

age: juvenile


Spike-in Intensity:   

12.2904


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.004327



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL45639665671764512023125.07-
chrUn_GL45638948441630510678120.78-
chr871427160714371227143317048.9772-
chr1293571095935808539357714643.6283-
chr514666068414668786914666670043.4114-
chr1297055589970673499706154039.0565+
chr514760578314761558814761154137.7645-
chr1630823689308335843082960728.8695-
chr312893085612894070212893678816.3305-
chr698842729895998988996814.9107+
Download the Full Peak List




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