DNA Damage Atlas


GSM4122794-p53-HET_END-seq




Basic Information

Manual

Sample ID:   

SRR10286897


Source Project ID:   

GSE138915

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

p53+/-


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

age: adult


Spike-in Intensity:   

36.3173


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.035178



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL4563894669158321067867.4389-
chrUn_GL4563966127178591202151.6604-
chr1293571146935830819357714015.5439-
chr312893078212894078512893678811.0085-
chrX14347738614348898114348303210.7617+
chr129705553797067687970616767.47565+
chr51466607191466706951466667006.94322-
chr87142720371437163714331705.45227-
chr69884135989595098899682.99091+
chr51476057891476155611476115402.97344-
Download the Full Peak List




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