DNA Damage Atlas


GSM4122804-ATM-KO_MRE11_ChIP-seq




Basic Information

Manual

Sample ID:   

SRR10286907


Source Project ID:   

GSE138915

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

ATM-/-


Harvested Time:   

age: juvenile


Spike-in percentage:   

1:50


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

ChIP-seq (anti-MRE11)


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
rDNA170961322.5938/
rDNA41961436114304321.8743/
rDNA62789343732021.5984/
rDNA9771114811022620.3861/
rDNA56675852576319.0337/
chrM21689136318.0102/
chrM10960157271214117.976/
chrM17555613340017.4067/
chrUn_JH58430410675610692110683716.3105/
rDNA25435266962655914.341/
Download the Full Peak List



Motif Analysis

Manual





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