DNA Damage Atlas

GSM4126115-K562_treated_with_DMSO_for_24_hours_without_formaldehyde_crosslinking

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR10298689


Source Project ID:   

GSE139011

Cell Type:   

K562


Organism:   

Homo sapiens


Treatment:   

DMSO


Treatment Time:   

24hrs


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

SSiNGLe


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1266451171664516636645132611330.2/
chr23309158033092087330917864397.48/
chr139184063291840952918407911752.36/
chr116890004868900423689002341523.21/
chr157791036477910904779107831057.78/
chr71052445921052449031052447461048.52/
chr5583583455835862258358482991.759/
chr7142560462142560777142560618932.932/
chr2215030029215030312215030169787.663/
chr6160521551160521853160521701753.966/
Download the Full Peak List


Visualization

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Motif Analysis

Manual





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