DNA Damage Atlas

GSM4126118-K562_treated_with_DMSO_for_36_hours_without_formaldehyde_crosslinking

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

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Sample ID:   

SRR10298692


Source Project ID:   

GSE139011

Cell Type:   

K562


Organism:   

Homo sapiens


Treatment:   

DMSO


Treatment Time:   

36hrs


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

SSiNGLe


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

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Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1266451171664514166645129214759.7/
chr116890004568900333689001883245.84/
chr157791066577910905779107841686.79/
chr23309158133092391330917841468.13/
chr74157827341578543415784071360.07/
chr5611355556113583261135692888.739/
chr2147562819147563087147562952867.552/
chr13918406729184119191840811860.394/
chr2215030016215030310215030162800.134/
chr11437030354370336643703199733.418/
Download the Full Peak List


Visualization

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Motif Analysis

Manual





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