DNA Damage Atlas

GSM4126121-K562_treated_with_DMSO_for_48_hours_without_formaldehyde_crosslinking

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR10298695


Source Project ID:   

GSE139011

Cell Type:   

K562


Organism:   

Homo sapiens


Treatment:   

DMSO


Treatment Time:   

48hrs


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

SSiNGLe


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1266451171664514746645132131294.5/
chr23309158033092180330917794547.82/
chr157791066577911061779108622638.53/
chr116889965568900368689002071529.01/
chr71425604751425607761425606241324.25/
chr21475627971475631021475629481105.21/
chr71052445911052449031052447461086.9/
chr74157816541578544415783531034.63/
chr5583583455835862358358483892.312/
chr11437030344370330843703170858.078/
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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