DNA Damage Atlas

GSM4126202-Nuclei_from_H2O2-treated_cells_digested_with_Nt.BbvCI_and_then_treated_with_SAP_bioreplica_3

Basic Information Genome Browser Quantification Visualization


Basic Information

Manual

Sample ID:   

SRR10298776


Source Project ID:   

GSE139011

Cell Type:   

K562


Organism:   

Homo sapiens


Treatment:   

H2O2


Treatment Dose:   

0.5mM


Targeted break:   

Nt.BbvCI


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

SSiNGLe


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrM1303913040/153941/
chrUn_gl00022437323733/108777/
chrUn_gl00022449764977/79515.1/
chr9134116368134116369/68064.9/
chr222307043623070437/64248.2/
chr6167209979167209980/61067.6/
chr31048146710481468/56614.7/
rDNA4099540996/55978.6/
chrUn_gl0002241130411305/54070.2/
chr9134083986134083987/53434.1/
Download the Full Peak List


Visualization

Manual





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