DNA Damage Atlas


GSM4136235-END-seq_WT_Juvenile




Basic Information

Manual

Sample ID:   

SRR10335940


Source Project ID:   

GSE139289

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6N (B6/B6)


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

age: juvenile (14 days)


Spike-in Intensity:   

11.4064


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.004681



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL45639666801777012023109.183-
chrUn_GL45638984141390810678105.457-
chr129705557997067583970617869.74595-
chrX1434776671434888071434830328.25129+
chr118960409389619721896108026.44826-
chr139538478895399844953911215.91017-
chr109267341592688228926825195.13099+
chr63777217137786783377786314.59722-
chr16848235768496582684899024.5503+
chr123458770734602840345962014.54364+
Download the Full Peak List




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