DNA Damage Atlas


GSM4136236-END-seq_ZCWPW1-KO_Juvenile




Basic Information

Manual

Sample ID:   

SRR10335941


Source Project ID:   

GSE139289

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6N (B6/B6)


Genotype:   

Zcwpw1-/-


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

age: juvenile (14 days)


Spike-in Intensity:   

12.7018


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.007052



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL45638968521543510678181.865-
chrUn_GL45639662581626412023117.672-
chr1297055697970676739706178644.1914-
chr1210425231710426750710425860923.9484-
chr1189603614896198278961080223.7638-
chr1179538878795545097954605120.8835-
chr1092673516926890829268010119.6481-
chr1395384561953994379539112119.3248-
chr238129800381454003813652117.6741-
chr941842882418582834184951017.0924-
Download the Full Peak List




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