DNA Damage Atlas


GSM4136237-END-seq_WT_Adult




Basic Information

Manual

Sample ID:   

SRR10335942


Source Project ID:   

GSE139289

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6N (B6/B6)


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

age: adult


Spike-in Intensity:   

9.57943


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.007418



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL4563966102177781202164.1639-
chrUn_GL4563894783162771067861.5817-
chr1297055641970676229706144331.1019+
chr698840449895879988996810.5898+
chrX14347708114348895114348303210.0951+
chrX1699664701699948871699838724.47929+
chr118960446389619219896108024.41945-
chr22258377022596077225897583.6096-
chr139538476695399332953911213.58725-
chr63777228637786719377786313.32608-
Download the Full Peak List




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