DNA Damage Atlas


GSM4136238-END-seq_ZCWPW1-KO_Adult




Basic Information

Manual

Sample ID:   

SRR10335943


Source Project ID:   

GSE139289

Cell Type:   

Testis


Organism:   

Mus musculus


Strain:   

C57BL/6N (B6/B6)


Genotype:   

Zcwpw1-/-


In-situ Treatment:   

Exo VII + Exo T


Harvested Time:   

age: adult


Spike-in Intensity:   

2.66618


Spike-in percentage:   

2%


Layout:   

SINGLE


Instrument model:   

NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.011921



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL4563896022137261067877.9336-
chrUn_GL4563968366178401202151.1173-
chr1297055617970674249706144347.0824+
chr1210425252710426623310425860912.7827-
chr1189604340896193878961080212.5046-
chr698848419895591989011812.471-
chrX14347727514348865714348310210.8268-
chr1092674063926887699268010110.4354-
chr1645676734456903414568510610.1335+
chr91150929141151056231151011989.51807+
Download the Full Peak List




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