DNA Damage Atlas


GSM4160251-ETO_WO_Exo7--ExoT




Basic Information

Manual

Sample ID:   

SRR10446255


Source Project ID:   

GSE140372

Cell Type:   

Primary B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Etoposide


Treatment Time:   

2hrs, washout 0 hr


Treatment Dose:   

50uM


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Cell Phase:   

G1


Spike-in Intensity:   

78.1268


Spike-in percentage:   

2.50%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.005231



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr51466664291466670891466667071404.02-
chrUn_GL456396114611231712018708.332-
chr5147611268147611758147611541655.975-
chr16308292273082999530829607608.473-
chr8714329487143344271433165419.249-
chrUn_GL45638999021095610681299.642-
chr9903021849030239890302386230.73-
chr12935765789357749293577146206.558-
chr3128936576128936808128936789202.057-
chr17531524305315303553152569182.819+
Download the Full Peak List



Motif Analysis

Manual





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