DNA Damage Atlas


GSM4160255-ETO--BTZ_WO_Exo7--ExoT




Basic Information

Manual

Sample ID:   

SRR10446259


Source Project ID:   

GSE140372

Cell Type:   

Primary B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Etoposide + Bortezomib


Treatment Time:   

2hrs, washout 0 hr


Treatment Dose:   

50uM Etoposide + 5uM Bortezomib


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Cell Phase:   

G1


Spike-in Intensity:   

119.226


Spike-in percentage:   

2.50%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.003861



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr51466664821466669201466667072304.08-
chrUn_GL4563961181512188120182036.82-
chr51476112981476116321476115411133.52-
chr12935768459357735293577146881.923-
chr3128936573128936923128936789786.877-
chr16308292273082975230829607693.529-
chr8714329527143329871433165613.735-
chrUn_GL456389102261118710678475.954-
chr16338203233382150533820927399.489+
chr9903021789030239890302386399.311-
Download the Full Peak List



Motif Analysis

Manual





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