DNA Damage Atlas


GSM4160262-no_BTZ--ETO




Basic Information

Manual

Sample ID:   

SRR10446266


Source Project ID:   

GSE140372

Cell Type:   

Primary B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Etoposide


Treatment Time:   

2hrs


Treatment Dose:   

50uM


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Cell Phase:   

G1


Spike-in Intensity:   

18.2358


Spike-in percentage:   

2.50%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.021044



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL456389994511354106782980.69-
chrUn_GL456396116001244712055409.66-
chrX143482640143483239143483102130.343-
chr1954872695488621548806389.2567-
chrX11628716711628737411628716975.7296+
chr1633820298338221153382092075.0419+
chr214717696314718001014717792866.0973+
chr222587457225905222258975858.1711-
chr1297061302970621279706144342.8877+
chr743377694433790234337846539.4589-
Download the Full Peak List



Motif Analysis

Manual





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