DNA Damage Atlas


GSM4160264-WT_ETO_Exo7--ExoT




Basic Information

Manual

Sample ID:   

SRR10446268


Source Project ID:   

GSE140372

Cell Type:   

Primary B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

Etoposide


Treatment Time:   

2hrs


Treatment Dose:   

50uM


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Cell Phase:   

G1


Spike-in Intensity:   

30.9769


Spike-in percentage:   

2.50%


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.00942



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL4563961181512196120181916.11-
chr5146666282146667007146666707591.59-
chrUn_GL45638999431095610787428.061-
chrX143482875143483239143483032313.698+
chr8714329307143317171433171288.352-
chr5147611230147611631147611541214.415-
chr16308291513082963030829607205.766-
chr12935768569357731093577146152.968-
chrX116287165116287375116287169131.935+
chr1633819842338215593382092790.2583+
Download the Full Peak List



Motif Analysis

Manual





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