DNA Damage Atlas


GSM4176074-END_seq_THY




Basic Information

Manual

Sample ID:   

SRR10493687


Source Project ID:   

GSE140635

Cell Type:   

Primary T cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Genotype:   

WT


In-situ Treatment:   

Exo VII + Exo T


Cell Phase:   

G1


Spike-in Intensity:   

no spike in


Layout:   

SINGLE


Instrument model:   

Illumina NextSeq 550


Technique:   

END-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Telomere Analysis

Manual

Ratio of (G-rich strand/C-rich strand): 0.008678



Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrUn_GL4563961155412691120231390.41-
chrUn_GL456389102141096010680513.708-
chr14541875735418811554187894445.921-
chr14535453055354581253545525358.401+
chr14541774465417828954177920335.608-
chr14541684415416906754168685327.515-
chrX143482648143483239143483079317.809-
chr14541844955418501754184698315.094-
chr14541569765415781954157279306.846-
chr14541544475415521454155004251.926-
Download the Full Peak List



Motif Analysis

Manual





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