DNA Damage Atlas


GSM4178016-HTGTS_PB_VK1_117_WT_REP6




Basic Information

Manual

Sample ID:   

SRR10495434


Source Project ID:   

GSE140672

Cell Type:   

Abel pre-B cell


Organism:   

Mus musculus


Strain:   

C57BL/6


Treatment:   

imatinib


Treatment Time:   

48hrs


Treatment Dose:   

3mM


Genotype:   

WT


In-situ Treatment:   

G1


Targeted break:   

Vκ1–117 bait


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr668425859684263126842608044743.6+
chr668256647682572076825687744447.6+
chr670751555707520317075178133094.3+
chr670721554707241877072256231147.1+
chr114799090614799112314799111731053.6-
chr312062631312062652712062651821432.3-
chr668037100680376176803731820813.6-
chr668050078680507026805045718856+
chr115920472215920494615920494418821.7-
chr1453545312535455295354551818046.9-
Download the Full Peak List



Motif Analysis

Manual





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