DNA Damage Atlas

GSM4178044-HTGTS_PBMC_B_VK3_20

Basic Information Genome Browser Distribution Quantification Visualization Motif Analysis


Basic Information

Manual

Sample ID:   

SRR10495462


Source Project ID:   

GSE140672

Cell Type:   

PBMC B cell


Organism:   

Homo sapiens


Genotype:   

N/A


Targeted break:   

Vκ3–20 bait


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  



Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)



Distribution

Manual




Genomic distribution Repeat distribution Top 10 simple repeats


Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr2891598738916163889161435337374-
chr2892032568920350989203504185790-
chr290109087901093089010909082818.2+
chr289158891891593378915911773215-
chr289277670892779888927789366712.7-
chr289197078891975158919730254257.4-
chr289131324891325018913228550715.5-
chr289428781894293388942903441074.6-
chr289427961894281808942817937038.7-
chr289416614894168328941682333392.4-
Download the Full Peak List


Visualization

Manual



Motif Analysis

Manual





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