DNA Damage Atlas


GSM4202690-NHF1CPD36minR1




Basic Information

Manual

Sample ID:   

SRR10586653


Source Project ID:   

GSE138846

Cell Type:   

Normal human fibroblast cell


Organism:   

Homo sapiens


Treatment:   

UV (254 nm)


Treatment Time:   

20s


Treatment Dose:   

1J/m2/s


Genotype:   

WT


Harvested Time:   

repair time: 36min


Layout:   

SINGLE


Instrument model:   

illumina HiSeq 4000


Technique:   

XR-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr912397568712397584612397576519.6614/
chr343383042433831734338310619.6526/
chr1257623495576236795762358616.99/
chr515989508615989538515989524616.6056/
chr315688391156886611568851816.346/
chr913158950313158963013158956515.9276/
chr243037858430380654303796015.1022/
chr314452178144524751445228814.86/
chr1260651015606511406065107614.7114/
chr1941083444410835704108350614.5946/
Download the Full Peak List



Motif Analysis

Manual





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