DNA Damage Atlas


GSM4224542-ESC-NPC_line1_Chr12_DMSO_ExpC




Basic Information

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Sample ID:   

SRR10733984


Source Project ID:   

GSE142289

Cell Type:   

ESC-NPCs line 1


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr12 HTGTS bait


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr1796903547969072079690578325.671-
chr12111039917111040835111040495227.224+
chr5121652549121652751121652750196.692-
chr13983429898345349834498168.355-
chr13901161490118609011814121.134-
chr16172221761722253617222336110.366+
chr9123461803123462182123461903104.833+
chr218191846018191891318191856487.7082+
chr1691534489915348359153463586.1239+
chr782771085827721488277128584.0984-
Download the Full Peak List



Motif Analysis

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