DNA Damage Atlas


GSM4224551-ESC-NPC_line1_Chr15_DMSO_ExpD




Basic Information

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Sample ID:   

SRR10733993


Source Project ID:   

GSE142289

Cell Type:   

ESC-NPCs line 1


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr15 HTGTS bait


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr10604456626044586460445863962.186-
chr4833139988332017083317190825.392-
chr12863621418636251586362341765.849-
chr16319020443190224631902045607.696+
chr7132058374132058815132058604510.318+
chr15105468211054985910548571441.103+
chr16925151469251800992516308403.751+
chr7102713810102716549102715760395.886+
chr4102619947102620152102620150349.302-
chr17702698857027047570270125312.088+
Download the Full Peak List



Motif Analysis

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