DNA Damage Atlas


GSM4224567-ESC_line_2_Chr12_DMSO_ExpD




Basic Information

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Sample ID:   

SRR10734009


Source Project ID:   

GSE142289

Cell Type:   

mESC line2


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr12 HTGTS bait


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr17285477912854799828547793594.486+
chrX395441853954439139544388469.363-
chr4126626418126626634126626619284.858-
chr1101032591101032793101032592217.572+
chr17992345299238209923652214.97-
chr17292276792922801729227679208.045+
chr9152911661529154215291368187.019-
chr7733068067330731073307077174.403+
chr1124761243124761447124761245172.351+
chr17284256352842583928425839172.351-
Download the Full Peak List



Motif Analysis

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