DNA Damage Atlas


GSM4224574-ESC_line_2_Chr15_DMSO_ExpC




Basic Information

Manual

Sample ID:   

SRR10734016


Source Project ID:   

GSE142289

Cell Type:   

mESC line2


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr15 HTGTS bait


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr163190204431902251319020458084.6+
chr106044566260445864604458633012.62-
chr128636226686362508863622811886+
chr21701035241701037261701035241807.57+
chr115617020456170427561704251637.35-
chr51369826241369828261369828251054.42-
chrX844378088443803584437808938.293+
chr12129924231299460612994053933.872-
chr13453986154539881745398616753.156+
chr7904418229044202490442022753.156-
Download the Full Peak List



Motif Analysis

Manual





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