DNA Damage Atlas


GSM4224580-ESC-NPC_line_2_Chr7_DMSO_ExpA




Basic Information

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Sample ID:   

SRR10734022


Source Project ID:   

GSE142289

Cell Type:   

ESC-NPCs line 2


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr7 HTGTS bait


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr18145551881455608514555418558.199-
chr2161981753161983523161982500471.473+
chr11113174124113176120113174914365.828-
chr14703527697035358870353344356.627-
chr8414281614142836941428161351.055+
chr13247260912472633324726327344.838-
chr1107265075107266789107266174310.384+
chr14275281502752850627528258293.015+
chr10569948715699531956995083256.127-
chr1186177614186177818186177616255.67+
Download the Full Peak List



Motif Analysis

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