DNA Damage Atlas


GSM4224588-ESC-NPC_line_2_Chr12_DMSO_ExpA




Basic Information

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Sample ID:   

SRR10734030


Source Project ID:   

GSE142289

Cell Type:   

ESC-NPCs line 2


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr12 HTGTS bait


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr17285477902854800428547790438.886+
chr12111039956111041279111040501283.966+
chr5774525857745278977452585230.2+
chr6534342545343445853434454230.2-
chr9103497688103497893103497888229.077-
chr7827716358277219482771636196.02+
chr9123461923123462252123461952190.318+
chr3824519782454748245239169.534+
Download the Full Peak List



Motif Analysis

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