DNA Damage Atlas


GSM4224599-ESC-NPC_line_2_Chr15_DMSO_ExpD




Basic Information

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Sample ID:   

SRR10734041


Source Project ID:   

GSE142289

Cell Type:   

ESC-NPCs line 2


Organism:   

Mus musculus


Strain:   

C57BL/6/129SVE


Treatment:   

DMSO


Treatment Time:   

72hrs


Treatment Dose:   

1:590 diluted


Genotype:   

Xrcc4-/- p53-/-


Targeted break:   

chr15 HTGTS bait


Layout:   

PAIRED


Instrument model:   

NextSeq 550


Technique:   

HTGTS


Fastqc:  




Genome Browser

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  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

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Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr10604456616044586560445863901.173-
chr12863621418636251486362271897.721+
chr16319020413190225131902045531.508+
chr15105473191054985110548573363.032+
chr7132058365132058842132058604344.114+
chrX844376738443804184437808338.989+
chr16925148499251800992516308299.196+
chr7102714615102716864102715760274.422+
chr17702699027027047570270128240.627+
chr7346887183469002834689111230.551-
Download the Full Peak List



Motif Analysis

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