Sample Detail

Basic Information

Manual

Sample ID:

SRR10836739

Source Project ID:

GSE142777

Cell Type:

v-Abl pro-B cell

Organism:

Mus musculus

Treatment:

RAG2 nucleofected + STI-571

Treatment Time:

STI-571: 4days

Treatment Dose:

3uM STI-571

Genotype:

Rad21degron, Emu-Bcl2, RAG2 deficient

Layout:

PAIRED

Instrument model:

Illumina MiSeq

Technique:

LAM-HTGTS

Fastqc:

Genome Browser

Manual

link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)

Distribution

Manual

Genomic distribution	Repeat distribution	Top 10 simple repeats

Quantification

Manual

Peak Intensity

Top 10 Peaks

Chromosome	Start	End	Summit	Intensity	Strand
chr12	113496128	113496908	113496330	609312	+
chr12	113434869	113435128	113434875	563834	+
chr12	113457531	113457773	113457533	151994	+
chr12	113451871	113452690	113452072	119123	+
chr12	113476311	113476741	113476511	107731	+
chr12	113462190	113462414	113462193	102018	+
chr12	113467184	113467407	113467185	92206.3	+
chr12	113489042	113489835	113489563	78028.8	+
chr12	113485242	113485485	113485244	39069.2	+
chr12	113449200	113449640	113449398	33395.4	+

Download the Full Peak List

Overlapped Peaks from Replicates

Average Peak Intensity

Top 10 Merged Peaks

Chromosome	Start	End	Summit	Intensity	Strand
chr12	113496134	113496617	113496330	922609	+
chr12	113489560	113489793	113489563	294946	+
chr12	113432983	113434186	113433476	8032.89	-
chr6	70723548	70723883	70723551	970.965	+

Download the Full Merged Peak List

Visualization

Manual

Profile

Heatmap

Download the matrix file

Motif Analysis

Manual

Download