DNA Damage Atlas


GSM4252122-JH4_Rad21degron_IAA_b_rep3




Basic Information

Manual

Sample ID:   

SRR10836742


Source Project ID:   

GSE142777

Cell Type:   

v-Abl pro-B cell


Organism:   

Mus musculus


Treatment:   

RAG2 nucleofected + STI-571 + IAA


Treatment Time:   

IAA:6hrs + STI-571: 4days + IAA: 3days


Treatment Dose:   

3uM STI-571 + 500uM IAA


Genotype:   

Rad21degron, Emu-Bcl2, RAG2 deficient


Layout:   

PAIRED


Instrument model:   

Illumina MiSeq


Technique:   

LAM-HTGTS


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chr12113452077113452293113452078378265+
chr12113489566113489776113489569296033+
chr12113476517113476730113476517150101+
chr12113457539113457752113457539133423+
chr12113496136113496547113496336127489+
chr1211346219911346240411346219960650.7+
chr1211348524911348546411348525057829.7+
chr1211346719011346739611346719156045.1+
chr1211347186911347207711347186951236.5+
chr121134348781134351121134348812.09121e+06+
Download the Full Peak List



Motif Analysis

Manual





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