DNA Damage Atlas


GSM4260262-EdU-seq-WT_rep1




Basic Information

Manual

Sample ID:   

SRR10874228


Source Project ID:   

GSE143481

Cell Type:   

DLD-1


Organism:   

Homo sapiens


Genotype:   

MTBP-mAID/MTBP-WT-FLAG


Cell Phase:   

S


Layout:   

PAIRED


Instrument model:   

HiSeq X Ten


Technique:   

EdU-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
rDNA23153238142358482.4415/
rDNA28027293792857161.1928/
rDNA31078325953201656.46/
chrUn_gl00022013161913204713183242.5316/
rDNA12483156151373936.0648/
rDNA418112264233.9791/
chrUn_gl00022014270514330214294524.4324/
rDNA14483874168423.9535/
chrUn_gl00022013548813706213639823.0561/
rDNA16089170551643022.7097/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
rDNA23162238082358435.8063
rDNA28037292292857131.578
rDNA31097325953201627.8668
chrUn_gl00022014270514324114294522.1035
rDNA41885864218.9678
chrUn_gl00022013161913202813183218.5948
rDNA14602234168417.5099
rDNA12483149521373916.2462
rDNA41533423894213715.4913
rDNA63167213650713.0434
Download the Full Merged Peak List



Motif Analysis

Manual





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