DNA Damage Atlas


GSM4280349-INO80-FRB_Break-seq_rep1




Basic Information

Manual

Sample ID:   

SRR10956367


Source Project ID:   

GSE144072

Organism:   

Saccharomyces cerevisiae


Treatment:   

Rapamycin


Treatment Time:   

3hrs


Treatment Dose:   

8ug/ml


Genotype:   

INO80-FRB


Layout:   

PAIRED


Instrument model:   

NextSeq 500


Technique:   

Break-seq


Fastqc:  




Genome Browser

Manual

  link to genome browser visualization (rDNA locus is firstly shown for human and mouse samples)




Quantification

Manual

Peak Intensity Top 10 Peaks
Chromosome Start End Summit Intensity Strand
chrXII4894954908944902101673.36/
chrVIII211925216538212939422.962/
chrV443106449680443856266.003/
chrXIII195964202501201791253.509/
chrXVI560886275561914245.152/
chrXV117372123974122379244.647/
chrXII475699482658476433231.941/
chrXIII183968190382188956227.13/
chrI159928166476160697221.82/
chrXIII205850320219.85/
Download the Full Peak List



Overlapped Peaks from Replicates




Average Peak Intensity Top 10 Merged Peaks
Chromosome Start End Summit Intensity Strand
chrXII4896664906924902102262/
chrVIII212099216400212939450.005/
chrV443251449559443856274.91/
chrXIII196137202390201791262.115/
chrXV117563123831122379253.764/
chrXVI562566260461914253.563/
chrXII475826481904476433250.721/
chrXIII184058190213188956234.261/
chrI160051166352160697228.317/
chrIV109564111018571100553225.88/
Download the Full Merged Peak List



Motif Analysis

Manual





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